NSF CAREER Award Recipient So Young Ryu Explores Many Aspects Of Cell Biology

So Young Ryu’s research by means of the College of Neighborhood Well being Sciences helps scientists generate and validate fascinating hypotheses utilizing software program instruments she and her scholar researchers are creating. 
Her CAREER proposal, supported by a $600,000 grant, focuses on the event of the protein post-translational modification evaluation.
Lately, Ryu was form sufficient to reply a number of questions on her analysis and its world well being influence for infectious ailments. She shares how she hopes the CAREER award will assist her develop as a analysis mentor and type a analysis group for this essential undertaking.
What impressed you to pursue this analysis? 

Protein post-translational modifications (PTMs) play an essential function in lots of features of cell biology. Nonetheless, because of the complicated nature of PTMs (e.g., varied PTM varieties and website areas), there are limitations within the mass spectrometry know-how used to precisely determine and quantify PTMs. We need to overcome such limitations by creating sound bioinformatic algorithms and using publicly accessible datasets. Particularly, we need to advance the sphere of mass spectrometry-based PTM evaluation as we i) develop and incorporate varied prediction/simulation instruments that make the most of publicly accessible information; ii) design statistical fashions that mirror information varieties, particularly for Knowledge Unbiased Acquisition mass spectrometry information which have a number of peptide fragments per spectrum; iii) precisely measure website occupancy fee and stoichiometry as an alternative of uncooked PTM peptide abundances; iv) develop a mixed-model framework to detect differential PTMs; v) generate fascinating hypotheses utilizing publicly accessible information; and vi) develop experimental design instruments that counsel the optimum selection of instrument strategies and pattern measurement calculation.  

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